2010 GS Rice and Wheat CI Data Management Workshop

Objectives

The objectives of the data management workshop are:

1. Develop and start to implement a data management strategy and workplan for the GCP Wheat CI.
2. Work with the GSR project as a user case of the IBP to demonstrate and, if agreed, implement an IBP compliant data management strategy for GSR.
3. Establish a team of Data Management experts in CAAS-CIMMYT so that they can support users from China wanting to use IBP compliant data management tools.

Logistics

• Dates: August 30 - September 3, 2010
• Venue: CAAS, Beijing, China

• [Final Logistics for China DMWS|]

Activities & Report

• Draft Program

Part I Data Management

AM 30 August 2001
Introduction about ICIS
Installation of ICIS
Pedigree Management : Create a parental list and crosses
PM 30 August 2001
Pedigree Management: Generate selection lines
AM 31 August 2001
Create Fieldbook Template
PM 31 August 2001
Create Fieldbook for Phenotyping Trial
AM 1 September 2001
Fieldlog Handheld Application
Discussion and Hands-on exercise with actual data

Part II Data Analysis

PM 1 September 2001
Principles and Methods of QTL Mapping (Huihui Li)
Practice on QTL IciMapping: (1) Build the linkage map (Luyan Zhang)
Practice on QTL IciMapping: (2) QTL mapping in biparental populations (Luyan Zhang)

AM 2 September 2001
QTL Mapping in F2 and CSSL Populations (Luyan Zhang)
Other QTL Mapping Methods (Huihui Li)
Practice on QTL IciMapping: (3) QTL mapping in F2 populations (Luyan Zhang)
Practice on QTL IciMapping: (4) Comparison of different mapping methods (Huihui Li)

PM 2 September 2001
Frequently Asked Question in QTL Mapping (Jiankang Wang)
Practice on QTL IciMapping: (5) QTL mapping in CSSL populations (Huihui Li)
Practice on QTL IciMapping: (6) Segregation distortion locus mapping (Luyan Zhang)

AM 3 September 2001
Introduction of Breeding Simulation (Jiankang Wang)
Practice on QuLine: (1) Build genetic models and a breeding population (Huihui Li)
Practice on QuLine: (2) Use QU-GENE engine (Huihui Li)

PM 3 September 2001
Applications of Breeding Simulation Tools (Jiankang Wang)
Practice on QuLine: (3) Build a breeding method (Huihui Li)
Practice on QuLine: (4) Run simulation experiments on QU-GENE interface (Huihui Li)

• Presentation/Training Materials

List of participants (to be announced)